A version better suited to printing is also available.
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Monday |
Tuesday |
| 8:15 |
Ferry from Auckland |
|
| 9:00 - 10:30 |
- Welcome (pdf)
- Poul Nielsen: Introduction to CellML (ppt)
- Andre: CSim, JSim (pdf)
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10:00 Ferry from Auckland |
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Morning Tea |
| 11:00 - 12:30 |
- Randall Britten: ABI Bioengineering Software R&D update (link, pdf)
- Andrew Miller: The CellML API: an update (pdf)
- Chris Bradley: OpenCMISS (pptx)
- Ting Yu: Evaluating the potential of using FPGAs to accelerate CellML models
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- Tommy Yu: Physiome Model Repository 2
- David Brooks: BioSignalML -- Putting biosignals onto the Semantic Web (pdf)
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Lunch |
| 13:30 - 15:00 |
- Richard Christie: FieldML update and future directions
- Andrew Miller: Representing Uncertainty in CellML (pdf)
- Andrew Miller: A Draft for CellML 1.2 (pdf)
- Andre: The Simulation Experiment Markup Language (SED-ML) (pdf)
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- Lukas Endler: BioModels.net: models database; MIRIAM services; identifiers.org (pdf)
- Vickie Shim, Peter Pivonka, Peter Hunter & Justin Fernandez: Multiscale modelling of the bone cartilage interface
- Shameer Sathar: GI modelling
- Harald Martens: Visualizing the consequences of model changes by multivariate metamodelling
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|
Afternoon Tea |
| 15:30 - 17:00 |
- Alan Garny: OpenCOR (pdf)
- Akira Amano: Description Language of Calculation Scheme for Automatic Simulation Code Generation (ppt)
- Takao Shimayoshi: Software Environment and Technologies for Cell Physiological Modelling (pdf)
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- Harvey Ho: Curate hepatology models (ppt)
- Maxwell Neal: Capturing the biophysical meaning of model contents with the SemSim architecture
- Mike Cooling: Discussion regarding model annotation (pptx)
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| 17:00 - 17:30 |
- Catherine Lloyd: My life with CellML
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- Peter Hunter: Overview of recent Physiome developments (pptx)
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| 18:15 |
Ferry to Auckland |
