Obtaining the source

The Physiome Model Repository is open source software. However, the Subversion server on which it resides is currently only available within the University, and it doesn't support anonymous access, so you need to get an account first (our IT group are working on this, and anonymous access from anywhere will be available at some point in time).

The instructions here currently require that you have the appropriate access. If you don't, you can e-mail ak.miller@auckland.ac.nz and ask for a checkout from SVN to be performed (if you want a specific branch, or the source from a particular time, you can ask for this too).

Note that cvs means cvs.bioeng.auckland.ac.nz.

This assumes you already have a working Zope 2 (e.g. 2.7.8 and 2.8.7 are known to work) and Plone (e.g. 2.1.2, 2.0.* probably also okay). You also need to have installed:

• The 4suite python library. Note that the full version with RDF support seems to lag behind the 4Suite XML-only release. Make sure you get a full release, rather than an 4Suite XML release.
• PyXML.
• TextIndexNG.
• Plone Collector NG. This needs to be installed into your Products directory.

I assume zope_instance is your Zope instance directory, obviously you need to fix this to be the correct directory.

cd zope_instance/Products
svn co svn+ssh://cvs/svn/physiome/plone_products/cellmlmetadatautils/trunk cellmlmetadatautils
svn co svn+ssh://cvs/svn/physiome/plone_products/PhysiomeModelRepository/trunk PhysiomeModelRepository
touch PortalTransforms/unsafe_transforms/__init__.py