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Agenda - Auckland CellML weekly team meeting - 20090930
Agenda - Auckland CellML weekly team meeting
Located in Community / Meeting / Meeting Agendas
Repository RSS feed
Minor improvement to CellML Model Repository RSS feed
Located in About CellML / News
MathML to LaTeX XSLT instructions
How to convert the MathML in a CellML file to LaTeX
Located in Tools
David Cumin's Java CellML editor
A minimalistic Java GUI with 2D layout of components.
Located in Tools
Agenda - Auckland CellML weekly team meeting - 20091111
Agenda - Auckland CellML weekly team meeting
Located in Community / Meeting / Meeting Agendas
Agenda - Auckland CellML weekly team meeting - 20091125
Agenda - Auckland CellML weekly team meeting
Located in Community / Meeting / Meeting Agendas
File ZIP archive Simple CellML example demonstrating imports
The aim here iss to be very simple. There are two cellML components that can be imported: Bucket.cellml and massDependentValve.cellml. There are 4 test examples BucketTest1 through to BucketTest4. Each one progressively imports more components, putting simpler pieces together to make some slightly more complex plumbing each time. Note that a component can be reused more than once by a model that imports it. It just imports it more than once. The mathematical model: The bucket is leaky. The fuller it is, the faster it leaks. Bucket's can be connected to one another, e.g. the outflow from one bucket flows into the next. There is also a mass dependent flow controller, imagine this was one of the buckets, resting on one of the hoses connecting other buckets. As the mass on the hose varies, the flow rate through the hose varies. Note that there is no attempt to conserve matter, so one tap that claims to flow at x litres per minute can be fed as inflow into n buckets, and the net flow rate into them would be n times x. A note about how these were created: A trunk snapshot somewhere after PCEnv 0.2, but before PCEnv 0.3 was used to create these CellML files. Since some bugs remained, some editing of the raw XML was done directly in a text editor. At the time of writing this comment, PCEnv 0.3 release is imminent. A snapshot that is close to that release was used to create BucketTest4.cellml, by modifying BucketTest3.cellml, and PCEnv on its own was sufficient to do this, no additional editing was required. Regarding the choice of using a zip file: Currently, work is in progress to allow the CellML repository at cellml.org to support CellML 1.1 when imports are used. In the interim, a zip file is probably the easiest way of packaging interdependent CellML. Have fun, and please contact me if I can help you use CellML more effectively.
Located in Members / randall
File ZIP archive David Cumin's Java CellML editor - source zip
Source code for David Cumin's Java CellML editor.
Located in Tools / David Cumin's Java CellML editor
File application/java-archive CellMLGUIgo
Graphical CellML editor in Java, by David Cumin
Located in Tools / David Cumin's Java CellML editor