Repository Models

There are currently 343 unique models in the repository.

• Adrian, Chandler, Hodgkin, 1970
  Voltage clamp experiments in striated muscle fibres
• Albrecht, Colegrove, Friel, 2002
  Differential Regulation of ER Ca2+ Uptake and Release Rates Accounts for Multiple Modes of Ca2+-induced Ca2+ Release
• Albrecht, Colegrove, Hongpaisan, Pivovarova, Andrews, Friel, 2001
  Multiple Modes of Calcium-induced Calcium Release in Sympathetic Neurons I: Attenuation of Endoplasmic Reticulum Ca2+ Accumulation at Low [Ca2+]i during Weak Depolarisation
• Aon, Cortassa, 2002
  Coherent and robust modulation of a metabolic network by cytoskeletal organization and dynamics
• Asthagiri, Lauffenburger, 2001
  A Compuational Study of Feedback Effects on Signal Dynamics in a Mitogen-Activated Protein Kinase (MAPK) Pathway Model
• Bakker, Mensonides, Teusink, van Hoek, Michels, Westerhoff, 2000
  Compartmentation protects trypanosomes from the dangerous design of glycolysis
• Bakker, Michels, Opperdoes, Westerhoff, 1997
  Glycolysis in Bloodstream Form Trypanosoma brucei Can Be Understood in Terms of the Kinetics of the Glycolytic Enzymes
• Baylor, Hollingworth, Chandler, 2002
  Comparison of Simulated and Measured Calcium Sparks in Intact Skeletal Muscle Fibers of the Frog
• Beard, 2005
  A Biophysical Model of the Mitochondrial Respiratory System and Oxidative Phosphorylation
• Beeler, Reuter, 1977
  Reconstruction of the action potential of ventricular myocardial fibres
• Ben-Tal, 2006
  Simplified models for gas exchange in the human lungs
• Bernus, Wilders, Zemlin, Verschelde, Panfilov, 2002
  A computationally efficient electrophysiological model of human ventricular cells
• Bertram, Arnot, Zamponi, 2002
  Role for G protein Gbetagamma isoform specificity in synaptic signal processing: a computational study
• Bertram, Previte, Sherman, Kinard, Satin, 2000
  The Phantom Burster Model for Pancreatic Beta Cells
• Bertram, Satin, Pedersen, Luciani, Sherman, 2007
  Intra- and inter-islet synchronization of metabolically driven insulin secretion
• Bertram, Satin, Zhang, Smolen, Sherman, 2004
  Calcium and Glycolysis Mediate Multiple Bursting Modes in Pancreatic Islets
• Bertram, Sherman, 2004
  A Calcium-based Phantom Bursting Model for Pancreatic Islets
• Bertram, Smolen, Sherman, Mears, Atwater, Martin, Soria, 1995
  A role for calcium release-activated current (CRAC) in cholinergic modulation of electrical activity in pancreatic beta-cells
• Bhalla, Iyengar, 1999
  Emergent Properties of Networks of Biological Signaling Pathways
• Bindschadler, Sneyd, 2001
  A Bifurcation Analysis of Two Coupled Calcium Oscillators
• Bingzheng, Zhenye, Liansong, 1990
  A mathematical model of the regulation system of the secretion of glucocorticoids
• Bondarenko, Szigeti, Bett, Kim, Rasmusson, 2004
  A Computer Model for the Action Potential of Mouse Ventricular Myocytes
• Bonhoeffer, Rembiszewski, Ortiz, Nixon, 2000
  Risks and benefits of structured antiretroviral drug therapy interruptions in HIV-1 infection
• Boyett, Zhang, Garny, Holden, 2001
  Control of the pacemaker activity of the sinoatrial node by intracellular Ca2+. Experiments and modelling
• Brown, Choe, Shanahan, Czeisler, 1997
  A mathematical model of diurnal variations in human plasma melatonin levels
• Bueno, 2007
  Mathematical modeling and spectral simulation of genetic diseases in the human heart
• Butera, Rinzel, Smith, 1999
  Models of Respiratory Rhythm Generation in the Pre-Botzinger Complex. I. Bursting Pacemaker Neurons
• Cartwright, Husain, 1986
  A model for the control of testosterone secretion
• Chang, Fujita, 1999
  A kinetic model of the thiazide-sensitive Na-Cl cotransporter
• Chang, Fujita, 2001
  A numerical model of acid-base transport in rat distal tubule
• Chassagnole, Rais, Quentin, Fell, Mazat, 2001
  An integrated study of Threonine-pathway enzyme kinetics in Escherichia coli
• Chay, 1997
  Effects of extracellular calcium on electrical bursting and intracellular and luminal calcium oscillations in insulin secreting pancreatic beta-cells
• Chay, Lee, Fan, 1995
  Appearance of Phase-locked Wenchbach-like Rhythms, Devil's Staircase and Universality in Intracellular Calcium Spikes in Non-excitable Cell Models
• Chen, Calzone, Csikasz-Nagy, Cross, Novak, Tyson, 2004
  Integrative Analysis of Cell Cycle Control in Budding Yeast
• Chen, Csikasz-Nagy, Gyorffy, Val, Novak, Tyson, 2000
  Kinetic Analysis of a Molecular Model of the Budding Yeast Cell Cycle
• Chen, Popel, 2006
  Theoretical analysis of biochemical pathways of nitric oxide release from vascular endothelial cells
• Chen, Popel, 2007
  Vascular and perivascular nitric oxide release and transport: biochemical pathways of neuronal nitric oxide synthase (NOS1) and endothelial nitric oxide synthase (NOS3)
• Ciliberto, Novak, Tyson, 2003
  Mathematical Model of the Morphogenesis Checkpoint in Budding Yeast
• Ciliberto, Petrus, Tyson, Sible, 2003
  A kinetic model of the cyclin E/Cdk2 developmental timer in Xenopus laevis embryos
• Ciliberto, Tyson, 2000
  Mathematical Model for Early Development of the Sea Urchin Embryo
• Clancy, Rudy, 2001
  Cellular consequences of HERG mutations in the long QT syndrome: precursors to sudden cardiac death
• Clancy, Rudy, 2002
  Na Channel Mutation That Causes Both Brugada Syndrome and Long-QT Syndrome Phenotypes: A Simulation Study of Mechanism
• Colegrove, Albrecht, Friel, 2000
  Quantitive Analysis of Mitochondrial Ca2+ Uptake and Release Pathways in Sympathetic Neurons Reconstruction of the Recovery after Depolarisation-evoked [Ca2+] Elevations
• Cooling, Hunter, Crampin, 2007
  Modelling Hypertrophic IP3 Transients in the Cardiac Myocyte
• Cooling, Hunter, Crampin, 2008
  Hypertrophic Signals in Cardiac Myocytes: Activation of Calcineurin by Calcium and Calmodulin
• Cooling, Hunter, Crampin, 2008
  Modeling Biological Modularity with CellML
• Cooling, Hunter, Crampin, 2008
  Hypertrophic Signals in Cardiac Myocytes: Sensitivity of NFAT Cycling to Cytosolic Calcium
• Corrias, Buist, 2007
  A quantitative model of gastric smooth muscle cellular activation
• Corrias, Buist, 2008
  Quantitative cellular description of gastric slow wave activity
• Cortassa, Aon, Marban, Winslow, O'Rourke, 2003
  An Integrated Model of Cardiac Mitrochondrial Energy Metabolism and Calcium Dynamics
• Cortassa, Aon, Winslow, O'Rourke, 2004
  A Mitochondrial Oscillator Dependent on Reactive Oxygen Species
• Costa, Holmes, McCulloch, 2001
  Modelling Cardiac Mechanical Properties In Three Dimensions
• Courtemanche, Ramirez, Nattel, 1998
  Ionic mechanisms underlying human atrial action potential properties: insights from a mathematical model
• Cronwright, Rohwer, Prior, 2002
  Metabolic Control Analysis of Glycerol Synthesis in Saccharomyces cerevisiae
• Cui, Kaandorp, 2006
  Mathematical modeling of calcium homeostasis in yeast cells
• Cui, Kaandorp, 2008
  Simulating Complex Calcium-Calcineurin Signaling Network
• Curien, Ravanel, Dumas, 2003
  A kinetic model of the branch-point between the methionine and threonine biosynthesis pathways in Arabidopsis thaliana
• Dash, Bassingthwaighte, 2004
  Blood HbO2 and HbCO2 dissociation curves at varied O2, CO2, pH, 2,3-DPG and temperature levels
• Dawson, Lea, Irvine, 2003
  Kinetic model of the inositol trisphosphate receptor that shows both steady-state and quantal patterns of Ca2+ release from intracellular stores
• Demir, Clark, Giles, 1999
  Parasympathetic modulation of sinoatrial node pacemaker activity in rabbit heart: a unifying model
• Demir, Clark, Giles, Murphey, 1994
  A Mathematical Model of a Rabbit Sinoatrial Node Cell
• Demiray, 1981
  Large deformation analysis of some soft biological tissues
• Dempsher, Gann, Phair, 1984
  A mechanistic model of ACTH-stimulated cortisol secretion
• De Paor, Timmons, 1986
  A feedback oscillator model for circulatory autoregulation
• De Vries, Sherman, 2000
  Channel Sharing in Pancreatic Beta-Cells Revisited: Enhancement of Emergent Bursting by Noise
• De Vries, Sherman, 2001
  From Spikers to Bursters Via Coupling: Help from Heterogeneity
• De Young, Keizer, 1992
  A single-pool inositol 1,4,5-triphosphate-receptor-based model for agonist-stimulated oscillations in Ca 2+ concentration
• DiFrancesco, Noble, 1985
  A Model of Cardiac Electrical Activity Incorporating Ionic Pumps and Concentration Changes
• Dixit, Perelson, 2004
  Complex patterns of viral load decay under antiretroviral therapy: influence of pharmacokinetics and intracellular delay
• Dokos, Celler, Lovell, 1996
  Ion currents underlying sinoatrial node pacemaker activity: a new single cell mathematical model
• Dougherty, Wright, Yew, 2005
  Computational model of the cAMP-mediated sensory response and calcium-dependent adaptation in vertebrate olfactory receptor neurons
• Drouhard, Roberge, 1987
  Revised formulation of the Hodgkin-Huxley representation of the sodium current in cardiac cells
• Dumaine, Towbin, Brugada, Vatta, Nesterenko, Nesterenko, Brugada, Brugada, Antzelevitch, 1999
  Ionic mechanisms responsible for the electrocardiographic phenotype of the Brugada Syndrome are temperature dependent
• Earm, Noble, 1990
  A Model of the Single Atrial Cell: Relation between Calcium Current and Calcium Release
• Ebihara, Johnson, 1980
  Fast sodium current in cardiac muscle: A quantitative description
• Egli, Bertram, Sellix, Freeman, 2004
  Rhythmic secretion of prolactin in rats: action of oxytocin coordinated by vasoactive intestinal polypeptide of suprachiasmatic nucleus origin
• Enciso, Sontag, 2004
  On the stability of a model of testosterone dynamics
• Endresen, 1996
  Chaos in Weakly-coupled Pacemaker Cells
• Espinosa, 1998
  L'Echange Na+ /Ca2+ dans l'Hypertrophie Ventriculaire D'Altitude chez le Rat: Etude Electrophysiologique et Utilisation du Modele "Oxsoft Heart"
• Evans, Errington, Shelly, Feeney, Chapman, Godfrey, Smith, Chappell, 2004
  A mathematical model for the in vitro kinetics of the anti-cancer agent topotecan
• Faber, Rudy, 2000
  Action potential and contractility changes in [Na(+)](i) overloaded cardiac myocytes: a simulation study.
• Fall, Keizer, 2001
  Mitochondrial Modulation of Intracellular Ca2+ Signalling
• Fallon, Lauffenburger, 2000
  Computational Model for Effects of Ligand/Receptor Binding Properties on Interleukin-2 Trafficking Dynamics and T Cell Proliferation Response
• Farhy, Bowers, Veldhuis, 2007
  Model-projected mechanistic bases for sex differences in growth hormone regulation in humans.
• Faville, Pullan, Sanders, Smith, 2008
  A Biophysically Based Mathematical Model of Unitary Potential Activity in Interstitial Cells of Cajal
• Fenton, Karma, 1998
  Vortex dynamics in three-dimensional continuous myocardium with fiber rotation: Filament instability and fibrillation
• Fink, Slepchenko, Loew, 1999
  Determination of time-dependent inositol-1,4,5-triphosphate concentrations during calcium release in a smooth muscle cell
• Fink, Slepchenko, Moraru, Watras, Schaff, Loew, 2000
  An image-based model of calcium waves in differentiated neuroblastoma cells
• Fitzhugh, 1961
  Impulses and Physiological States in Theoretical Models of Nerve Membrane
• Flynn, Green, Pedley, Boxer, Dearling, Watson, Boden, Begent, 2002
  A Model-Based Approach for the Optimization of Radioimmunotherapy through Antibody Design and Radionuclide Selection
• Fohlmeister, Miller, 1997
  Impulse Encoding Mechanisms of Ganglion Cells in the Tiger Salamander Retina
• Fox, McHarg, Gilmour, 2002
  Ionic mechanism of electrical alternans
• Fridlyand, Tamarina, Philipson, 2003
  Modeling of Ca2+ flux in pancreatic beta-cells: role of the plasma membrane and intracellular stores
• Friel, 1995
  [Ca2+]i oscillations in sympathetic neurons: an experimental test of a theoretical model
• Gall, Susa, 1999
  Effect of Na/Ca Exchange on Plateau Fraction and [Ca]i in Models for Bursting in Pancreatic Beta-Cells
• Gardner, Dolnik, Collins, 1998
  A theory for controlling cell cycle dynamics using a reversibly binding inhibitor
• Garny, Kohl, Hunter, Boyett, Noble, 2003
  One-dimensional rabbit sinoatrial node models: benefits and limitations
• Gasser, Ogden, Holzapfel, 2006
  Hyperelastic modelling of arterial layers with distributed collagen fibre orientations
• Gilbert, Heiner, Rosser, Fulton, Gu, Trybilo,
  A Case Study in Model-driven Synthetic Biology
• Goforth, Bertram, Khan, Zhang, Sherman, Satin, 2002
  Calcium-activated K+ Channels of Mouse Beta Cells are Controlled by Both Store and Cytoplasmic Ca2+: Experimental and Theoretical Studies
• Goldbeter, 1991
  A Minimal Cascade Model for the Mitotic Oscillator Involving Cyclin and cdc2 Kinase
• Goldbeter, 1995
  A model for circadian oscillations in the Drosophila period protein (PER)
• Gonzalez-Heydrich, Steingard, Kohane, 1994
  A computer simulation of the hypothalamic-pituitary-adrenal axis
• Greenstein, Wu, Po, Tomaselli, Winslow, 2000
  Role of the Calcium-Independent Transient Outward Current Ito1 in Shaping Action Potential Morphology and Duration
• Grossman, Feinberg, Kuznetsov, Dimitrov, Paul, 1998
  HIV infection: how effective is drug combination treatment?
• Guccione, McCulloch, Waldman, 1991
  Passive Material Properties of Intact Ventricular Myocardium Determined From a Cylindrical Model
• Gupta, Aslakson, Gurbaxani, Vernon, 2007
  Inclusion of the glucocorticoid receptor in a hypothalamic pituitary adrenal axis model reveals bistability
• Guyton, Aldosterone, 2008
• Guyton, Angiotensin, 2008
• Guyton, Antidiuretic_Hormone, 2008
• Guyton, Atrial_Natriuretic_Peptide, 2008
• Guyton, Autonomics, 2008
• Guyton, Capillary_Dynamics, 2008
• Guyton, Circulatory_Dynamics, 2008
• Guyton, Electrolytes, 2008
• Guyton, Heart_Hypertrophy_or_Deterioration, 2008
• Guyton, Heart_Rate_and_Stroke_Volume, 2008
• Guyton, Kidney, 2008
• Guyton, Muscle_Blood_Flow_Control, 2008
• Guyton, Muscle_Oxygen_Delivery, 2008
• Guyton, Non_Muscle_Blood_Flow_Control, 2008
• Guyton, Non_Muscle_Oxygen_Delivery, 2008
• Guyton, Pulmonary_Fluid_Dynamics, 2008
• Guyton, Pulmonary_Oxygen_Uptake, 2008
• Guyton, Red_Cells_and_Viscosity, 2008
• Guyton, Stress_Relaxation, 2008
• Guyton, Thirst_Drinking_and_Salt_Appetite, 2008
• Guyton, Volume_Receptors, 2008
• Halloy, Bernard, Loussouarn, Goldbeter, 2002
  The Follicular Automaton Model: Effect of Stochasticity and of Synchronization of Hair Cycles
• Hatakeyama, Kimura, Naka, Kawasaki, Yumoto, Ichikawa, Kim, Saito, Saeki, Shirouzu, Yokoyama, Konagaya, 2003
  A computational model on the modulation of mitogen-activated protein kinase (MAPK) and Akt pathways in heregulin-induced ErbB signalling
• Hatzimanikatis, Lee, Bailey, 1999
  A mathematical description of regulation of the G1-S transition of the mammalian cell cycle
• Haugh, 2004
  Mathematical model of human growth hormone (hGH)-stimulated cell proliferation explains the efficacy of hGH variants as receptor agonists or antagonists
• Heinze, Keener, Midgley, 1998
  A mathematical model of luteinizing hormone release from ovine pituitary cells in perifusion
• Herz, Bonhoeffer, Anderson, May, Nowak, 1996
  Viral Dynamics in vivo: Limitations on estimates of intracellular delay and virus decay
• Heyd, Drew, 2003
  A Mathematical Model for Elongation of a Peptide Chain
• Hilgemann, Noble, 1987
  Excitation-contraction coupling and extracellular calcium transients in rabbit atrium: reconstruction of basic cellular mechanisms
• Hinch, Greenstein, Tanskanen, Xu, Winslow, 2004
  A Simplified Local Control Model of Calcium-Induced Calcium Release in Cardiac Ventricular Myocytes
• Hodgkin, Huxley, 1952
  A quantitative description of membrane current and its application to conductance and excitation in nerve
• Hoefnagel, Starrenburg, Martens, Hugenholtz, Kleerebezem, Van Swam, Bongers, Westerhoff, Snoep, 2002
  Metabolic engineering of lactic acid bacteria, the combined approach: kinetic modelling, metabolic control and experimental analysis
• Hornberg, Binder, Bruggeman, Schoeberl, Heinrich, Westerhoff, 2005
  Control of MAPK signalling: from complexity to what really matters
• Huang, Ferrell, 1996
  Ultrasensitivity in the mitogen-activated protein kinase cascade
• Hund, Rudy, 2004
  Rate dependence and regulation of action potential and calcium transient in a canine cardiac ventricular cell model
• Hunter, McCulloch, ter Keurs, 1998
  Modelling the mechanical properties of cardiac muscle
• Hunter, McNaughton, Noble, 1975
  Analytical models of propagation in excitable cells
• Hunter, Smaill, Hunter, 1995
  A pole-zero constitutive law for myocardium
• Hynne, Dano, Sorensen, 2001
  Full-scale model of glycolysis in Saccharomyces cerevisiae
• Iber, Maini, 2002
  A Mathematical Model for Germinal Centre Kinetics and Affinity Maturation
• 2006
  The International System of Units (SI) 8th Edition, 2006
• Iribe, Kohl, Noble, 2006
  Modulatory effect of calmodulin-dependent kinase II (CaMKII) on sarcoplasmic reticulum Ca2+ handling and interval-force relations: a modelling study.
• Irvine, Jafri, Winslow, 1999
  Cardiac sodium channel Markov model with temperature dependence and recovery from inactivation
• Itskov, Ehret, Mavrilas, 2006
  A Polyconvex Anisotropic Strain-Energy Function for Soft Collagenous Tissues
• Iyer, Mazhari, Winslow, 2004
  A computational model of the human left-ventricular epicardial myocyte
• Jafri, Rice, Winslow, 1998
  Cardiac Ca2+ Dynamics: The Roles of Ryanodine Receptor Adaptation and Sarcoplasmic Reticulum Load
• Jelic, Cupic, Kolar-Anic, 2005
  Mathematical modeling of the hypothalamic-pituitary-adrenal system activity
• Joseph, Zavros, Merchant, Kirschner, 2003
  A model for integrative study of human gastric acid secretion
• Karagiannis, Popel, 2004
  A theoretical model of type I collagen proteolysis by matrix metalloproteinase (MMP) 2 and membrane type 1 MMP in the presence of tissue inhibitor of metalloproteinase 2
• Karagiannis, Popel, 2006
  Distinct modes of collagen type I proteolysis by matrix metalloproteinase (MMP) 2 and membrane type I MMP during the migration of a tip endothelial cell: insights from a computational model
• Keener, 2001
  Diffusion Induced Oscillatory Insulin Secretion
• Keizer, Levine, 1996
  Ryanodine Receptor Adaptation and Ca2+-Induced Ca2+ Release-Dependent Ca2+ Oscillations
• Kesmir, De Boer, 1999
  A Mathematical Model on Germinal Center Kinetics and Termination
• Kholodenko, Demin, Moehren, Hoek, 1999
  Quantification of short term signalling by the epidermal growth
• Kirschner, Panetta, 1998
  Modeling immunotherapy of the tumor-immune interaction
• Kirschner, Webb, 1996
  A Model For Treatment Strategy In The Chemotherapy Of AIDS
• Kneller, Ramirez, Chartier, Courtemanche, Nattel, 2002
  Time-dependent transients in an ionically based mathematical model of the canine atrial action potential
• Komarova, Wodarz, 2003
  Evolutionary Dynamics of Mutator Phenotypes in Cancer: Implications for Chemotherapy
• Korzeniewski, Zoladz, 2001
  A model of oxidative phosphorylation in mammaliam skeletal muscle
• Kroll, 2000
  Parathyroid hormone temporal effects on bone formation and resorption
• Kurata, Hisatome, Imanishi, Shibamoto, 2002
  Dynamical description of sinoatrial node pacemaking: improved mathematical model for primary pacemaker cell
• Kyrylov, Severyanova, Vieira, 2005
  Modeling robust oscillatory behavior of the hypothalamic-pituitary-adrenal axis
• Lambeth, Kushmerick, 2002
  A Computational Model for Glycogenolysis in Skeletal Muscle
• LeBeau, Robson, McKinnon, Donald, Sneyd, 1997
  Generation of Action Potentials in a Mathematical Model of Corticotrophs
• LeBeau, Yule, Groblewski, Sneyd, 1999
  Agonist-dependent Phosphorylation of the Inositol 1,4,5-Triphosphate Receptor
• Leloup, Goldbeter, 2003
  Toward a detailed computational model for the mammalian circadian clock
• Leloup, Goldbeter, 2004
  Modeling the mammalian circadian clock: sensitivity analysis and multiplicity of oscillatory mechanisms
• Leloup, Gonze, Goldbeter, 1999
  Limit Cycle Models for Circadian Rhythms Based on Transcriptional Regulation in Drosophila and Neurospora
• Lemaire, Tobin, Greller, Cho, Suva, 2004
  Modeling the interactions between osteoblast and osteoclast activities in bone remodeling
• Lenbury, Pacheenburawana, 1991
  Modelling fluctuation phenomena in the plasma cortisol secretion system in normal man
• Lenbury, Pornsawad, 2005
  A delay-differential equation model of the feedback-controlled hypothalamus-pituitary-adrenal axis in humans
• Lenbury, Ruktamatakul, Amornsamarnkul, 2001
  Mathematical modeling of the hypothalamic-pituitary-adrenal system activity
• Li, Kuang, Mason, 2006
  Modeling the glucose-insulin regulatory system and ultradian insulin secretory oscillations with two explicit time delays
• Li, Rinzel, 1994
  Equations for InsP3 Receptor-mediated [Ca2+]i Oscillations Derived from a Detailed Kinetic Model: A Hodgkin-Huxley Like Formalism
• Lindblad, Murphey, Clark, Giles, 1996
  A Model of the Action Potential and Underlying Membrane Currents in a Rabbit Atrial Cell
• Liu, Hu, Peng, Liu, 1999
  A dynamical model for the pulsatile secretion of the hypothalamo-pituitary-adrenal axis
• Livshitz, Rudy, 2007
  Regulation of Ca2+ and electrical alternans in cardiac myocytes: role of CAMKII and repolarizing currents
• Lovell, Cloherty, Celler, Dokos, 2004
  A gradient model of cardiac pacemaker myocytes
• Luo, Rudy, 1991
  A Model of the Ventricular Cardiac Action Potential. Depolarization, repolarization and their interaction
• Luo, Rudy, 1994
  A Dynamic Model of the Cardiac Ventricular Action Potential I. Simulations of Ionic Currents and Concentration Changes
• MacGregor, Leng, 2005
  Modelling the hypothalamic control of growth hormone secretion.
• Magnus, Keizer, 1997
  Minimal Model of beta-cell mitochondrial Ca2+ handling
• Magnus, Keizer, 1998
  Model of beta_cell mitochondrial calcium handling and electrical activity. I. Cytoplasmic variables
• Mahajan , Shiferaw, Sato, Baher, Olcese, Xie, Yang, Chen, Restrepo, Karma, Garfinkel, Qu, Weiss, 2008
  A rabbit ventricular action potential model replicating cardiac dynamics at rapid heart rates
• Maly, Wiley, Lauffenburger, 2004
  Self-Organization of Polarized Cell Signaling via Autocrine Circuits: Computational Model Analysis
• Margarida Martins, Mendes, Coreiro, Poces Freire, 2001
  In situ kinetic analysis of glyoxalase I and glyoxalase II in Saccharomyces cerevisiae
• Marhl, Haberichter, Brumen, Heinrich, 2000
  Complex calcium oscillations and the role of mitochondria and cytosolic proteins
• Marhl, Schuster, Brumen, Heinrich, 1997
  Modelling the interrelations between calcium oscillations and ER membrane potential oscillations
• Martinov, Vitvitsky, Mosharov, Banerjee, Ataullakhanov, 2000
  A Substrate Switch: A New Mode of Regulation in the Methionine Metabolic Pathway
• Marwan, 2003
  Theory of Time-Resolved Somatic Complementation and Its Use to Explore the Sporulation Control Network in Physarum polycephalum
• Matsuoka, Sarai, Kuratomi, Ono, Noma, 2003
  Role of individual ionic current systems in ventricular cells hypothesized by a model study
• Mazhari, Greenstein, Winslow, Marban, Nuss, 2001
  Molecular Interactions Between Two Long-QT Syndrome Gene Products, HERG and KCNE2, Rationalized by In Vitro and In Silico Analysis
• McAllister, Noble, Tsien, 1975
  Reconstruction of the electrical activity of cardiac Purkinje fibres
• McKenzie, Sneyd, 1998
  On the Formation and Breakup of Spiral Waves of Calcium
• Michailova, McCulloch, 2001
  Model study of ATP and ADP buffering, transport of Ca2+ and Mg2+, and regulation of ion pumps in ventricular myocyte
• Miftakhov, Abdusheva, Christensen, 1999
  Numerical Simulation of Motility Patterns of the Small Bowel. I. Formulation of a Mathematical Model
• Mijailovich, Butler, Fredburg, 2000
  Perturbed Equilibria of Myosin Binding in Airway Smooth Muscle: Bond-Length Distributions, Mechanics and ATP Metabolism
• Mikane, Araki, Kohno, Nakayama, Suzuki, Shimuzi, Matsubara, Hirakawa, Takaki, Suga, 1997
  Mechanism of Constant Contractile Efficiency Under Cooling Intropy of Myocardium: Simulation
• Mittler, Sulzer, Neumann, Perelson, 1998
  Influence of delayed viral production on viral dynamics in HIV-1 infected patients
• Mlcek, Neumann, Kittnar, Novak, 2001
  Mathematical Model of the Electromechanical Heart Contractile System - Regulatory Subsystem Physiological Considerations
• Mohr, Taylor, Newell, 2008
  CODATA Recommended Values of the Fundamental Physical Constants: 2006
• Moore, Li, 2004
  A mathematical model for chronic myelogenous leukemia (CML) and T cell interaction
• Mosekilde, Lading, Yanchuk, Maistrenko, 2001
  Bifurcation structure of a model of bursting pancreatic cells
• Muller, Obeyesekere, Mills, Ram, 2008
  Network topology determines dynamics of the mammalian MAPK1,2 signaling network: bifan motif regulation of C-Raf and B-Raf isoforms by FGFR and MC1R
• Nagerl, Novo, Mody, Vergara, 2000
  Binding Kinetics of Calbindin-D28k Determined by Flash Photolysis of Caged Ca2+
• Nash, Panfilov, 2004
  Electromechanical model of excitable tissue to study reentrant cardiac arrhythmias
• Nelson, Murray, Perelson, 2000
  A model of HIV-1 pathogenesis that includes an intracellular delay
• Neumann, Lam, Dahari, Gretch, Wiley, Layden, Perelson, 1998
  Hepatitis C Viral Dynamics in Vivo and the Antiviral Efficacy of Interferon-alpha Therapy
• Nevo, Golding, Neumann, Schwartz, Akselrod, 2004
  Autoimmunity as an immune defense against degenerative processes: a primary mathematical model illustrating the bright side of autoimmunity
• Niederer, Hunter, Smith, 2006
  A quantitative analysis of cardiac myocyte relaxation: a simulation study
• Niederer, Smith, 2007
  A Mathematical Model of the Slow Force Response to Stretch in Rat Ventricular Myocytes
• Noble, 1962
  A Modification of the Hodgkin-Huxley Equations Applicable to Purkinje Fibre Action and Pace-Maker Potentials
• Noble, DiFrancesco, Denyer, 1989
  Ionic Mechanisms in Normal and Abnormal Cardiac Pacemaker Activity
• Noble, Noble, 1984
  A Model of Sino-Atrial Node Electrical Activity Based on a Modification of the DiFrancesco-Noble (1984) Equations
• Noble, Noble, 2001
  Remodelling of Calcium Dynamics in Guinea-Pig Ventricular Cells
• Noble, Noble, Bett, Earm, Ho, So, 1991
  The Role of Sodium-Calcium Exchange During the Cardiac Action Potential
• Noble, Varghese, Kohl, Noble, 1998
  Improved guinea-pig ventricular cell model incorporating a diadic space, IKr and IKs, and length- and tension-dependent processes.
• Uncited
• Novak, Csikasz-Nagy, Gyorffy, Chen, Tyson, 1998
  Mathematical model of the fission yeast cell cycle with checkpoint controls at the G1/S, G2/M and metaphase/anaphase transitions
• Novak, Pataki, Ciliberto, Tyson, 2001
  Mathematical model of the cell division cycle of fission yeast
• Novak, Tyson, 1997
  Modeling the control of DNA replication in fission yeast
• Nowak, Bangham, 1996
  Population Dynamics of Immune Responses to Persistent Viruses
• Nygren, Fiset, Firek, Clark, Lindblad, Clark, Giles, 1998
  Mathematical Model of an Adult Human Atrial Cell: The Role of K+ Currents in Repolarization
• Olsen, Hauser, Kummer, 2003
  Mechanism of protection of peroxidase activity by oscillatory dynamics
• Oomens, Maenhout, van Oijen, Drost, Baaijens, 2003
  Finite element modelling of contracting skeletal muscle
• Palecek, Horwitz, Lauffenburger, 1999
  Kinetic Model for Integrin-mediated Adhesion Release During Cell Migration
• Pandit, Clark, Giles, Demir, 2001
  A Mathematical Model of Action Potential Heterogeneity in Adult Rat Left Ventricular Myocytes
• Pandit, Giles, Demir, 2003
  A Mathematical Model of the Electrophysiological Alterations in Rat Ventricular Myocytes in Type-I Diabetes
• Pedersen, Bertram, Sherman, 2005
  Intra- and inter-islet synchronization of metabolically driven insulin secretion
• Perelson, Neumann, Markowitz, Leonard, Ho, 1996
  HIV-1 Dynamics in Vivo: Virion Clearance Rate, Infected Cell Life-Span, and Viral Generation Time
• Plant, 1981
  Bifurcation and resonance in a model for bursting nerve cells
• Potter, Greller, Cho, Nuttall, Stroup, Suva, Tobin, 2005
  Response to continuous and pulsatile PTH dosing: a mathematical model for parathyroid hormone receptor kinetics
• Potter, Zager, Barton, 2006
  Mathematical model for the androgenic regulation of the prostate in intact and castrated adult male rats.
• Priebe, Beuckelmann, 1998
  Simulation Study of Cellular Electrical Properties in Heart Failure
• Puglisi, Bers, 2001
  LabHEART: an interactive computer model of rabbit ventricular myocyte ion channels and Ca transport
• Purvis, Butera, 2005
  Ionic Current Model of a Hypoglossal Motoneuron
• Purvis, Smith, Koizumi, Butera, 2007
  Intrinsic Bursters Increase the Robustness of Rythm Generation in an Excitatory Network
• Ramirez, Nattel, Courtemanche, 2000
  Mathematical analysis of canine atrial action potentials: rate, regional factors, and electrical remodeling
• Rattananakul, Lenbury, Krishnamara, Wollkind, 2003
  Modeling of bone formation and resorption mediated by parathyroid hormone: response to estrogen/PTH therapy
• Reed, Nijhout, Sparks, Ulrich, 2004
  A mathematical model of the methionine cycle